CDS

Accession Number TCMCG016C11804
gbkey CDS
Protein Id OMO81096.1
Location join(9942..10123,10495..10606,10830..10865,10995..11054,11139..11196,11300..11397,12066..12155,12258..12326,12415..12501,12848..12943,13029..13106,13505..13591,14584..14644,19017..19234,19314..19460,19575..19790,20600..20704,20814..20918,21004..21099)
Organism Corchorus capsularis
locus_tag CCACVL1_12610

Protein

Length 666aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215142; BioSample:SAMN03290679;
db_source AWWV01010219.1
Definition DNA helicase, ATP-dependent, RecQ type [Corchorus capsularis]
Locus_tag CCACVL1_12610

EGGNOG-MAPPER Annotation

COG_category C
Description 2-oxoisovalerate dehydrogenase subunit beta
KEGG_TC -
KEGG_Module M00036        [VIEW IN KEGG]
M00083        [VIEW IN KEGG]
M00572        [VIEW IN KEGG]
KEGG_Reaction R04533        [VIEW IN KEGG]
R04534        [VIEW IN KEGG]
R04536        [VIEW IN KEGG]
R04543        [VIEW IN KEGG]
R04566        [VIEW IN KEGG]
R04953        [VIEW IN KEGG]
R04964        [VIEW IN KEGG]
R07599        [VIEW IN KEGG]
R07600        [VIEW IN KEGG]
R07601        [VIEW IN KEGG]
R07602        [VIEW IN KEGG]
R07603        [VIEW IN KEGG]
R07604        [VIEW IN KEGG]
R07759        [VIEW IN KEGG]
R07763        [VIEW IN KEGG]
R10116        [VIEW IN KEGG]
R10120        [VIEW IN KEGG]
R10996        [VIEW IN KEGG]
R10997        [VIEW IN KEGG]
R11671        [VIEW IN KEGG]
KEGG_rclass RC00027        [VIEW IN KEGG]
RC00029        [VIEW IN KEGG]
RC00117        [VIEW IN KEGG]
RC00627        [VIEW IN KEGG]
RC02743        [VIEW IN KEGG]
RC02883        [VIEW IN KEGG]
RC02949        [VIEW IN KEGG]
RC02953        [VIEW IN KEGG]
BRITE br01601        [VIEW IN KEGG]
ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko01004        [VIEW IN KEGG]
KEGG_ko ko:K00059        [VIEW IN KEGG]
ko:K00167        [VIEW IN KEGG]
EC 1.1.1.100        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
1.2.4.4        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00061        [VIEW IN KEGG]
ko00280        [VIEW IN KEGG]
ko00333        [VIEW IN KEGG]
ko00640        [VIEW IN KEGG]
ko00780        [VIEW IN KEGG]
ko01040        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
ko01110        [VIEW IN KEGG]
ko01130        [VIEW IN KEGG]
ko01212        [VIEW IN KEGG]
map00061        [VIEW IN KEGG]
map00280        [VIEW IN KEGG]
map00333        [VIEW IN KEGG]
map00640        [VIEW IN KEGG]
map00780        [VIEW IN KEGG]
map01040        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
map01110        [VIEW IN KEGG]
map01130        [VIEW IN KEGG]
map01212        [VIEW IN KEGG]
GOs GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005739        [VIEW IN EMBL-EBI]
GO:0005759        [VIEW IN EMBL-EBI]
GO:0005947        [VIEW IN EMBL-EBI]
GO:0006082        [VIEW IN EMBL-EBI]
GO:0006520        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0007154        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009056        [VIEW IN EMBL-EBI]
GO:0009063        [VIEW IN EMBL-EBI]
GO:0009081        [VIEW IN EMBL-EBI]
GO:0009083        [VIEW IN EMBL-EBI]
GO:0009267        [VIEW IN EMBL-EBI]
GO:0009314        [VIEW IN EMBL-EBI]
GO:0009416        [VIEW IN EMBL-EBI]
GO:0009605        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009642        [VIEW IN EMBL-EBI]
GO:0009646        [VIEW IN EMBL-EBI]
GO:0009743        [VIEW IN EMBL-EBI]
GO:0009744        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0009991        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0016054        [VIEW IN EMBL-EBI]
GO:0019752        [VIEW IN EMBL-EBI]
GO:0030062        [VIEW IN EMBL-EBI]
GO:0031667        [VIEW IN EMBL-EBI]
GO:0031668        [VIEW IN EMBL-EBI]
GO:0031669        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0034285        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042594        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043436        [VIEW IN EMBL-EBI]
GO:0043617        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044248        [VIEW IN EMBL-EBI]
GO:0044281        [VIEW IN EMBL-EBI]
GO:0044282        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044429        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045239        [VIEW IN EMBL-EBI]
GO:0045240        [VIEW IN EMBL-EBI]
GO:0046395        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071496        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0098798        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901565        [VIEW IN EMBL-EBI]
GO:1901575        [VIEW IN EMBL-EBI]
GO:1901700        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1990204        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGGCACTTCTTTGAGGAGTATTGGCAGAAGGGTAGGTGGCCTTCCCTTGTGTTGGAGGAGGCCATTTTCGACTGCTGTTTGCGATGTTGAGAATCAACAGACAGCTGCCAGTGCCAAATCCTTCAACCTTTACTCTGCCATTAACCAAGCTCTTCATATTGCGCTTGAAACTGATCCTCGGGCATTTGTTTTTGGAGAAGATGTGGGCTTTGGTGGAGTTTTCCGTTGCACAACGGGTCTTGCAGACCGGTTTGGTAAAAGTAGGGTGTTCAATACCCCTCTTTGTGAACAGGGCATTGTCGGATTTGGCATTGGCCTAGCTGCAATGGGAAATCGAGCCATAGCAGAAATACAGTTTGCAGATTACATTTTCCCTGCTTTTGATCAGATTGTAAATGAAGCTGCAAAGTTCAGATACCGTAGTGGCAATCAATTTAATTGTGGAGGTTTGACCATTAGAGCTCCATACGGTGCTGTGGGTCATGGTGGACATTACCACTCGCAATCACCTGAAGCTTTCTTTTGTCATGTACCTGGTATCAAAGTGGTCATTCCTCGCAGCCCACGGCAAGCTAAAGGATTACTGTTGTCATGTATCCGTGATCCAAACCCTGTTGTCTTTTTTGAACCAAAGTGGCTTTACCGTTTGGCAGTGGAAGAGGTTCCTGAGCATGATTATATGTTGCCTCTATCTGAGGCAGAGGTGATTCGTAAAGGCAGTGACATCACACTAGTAGGCTGGGGGGCTCAACTCTCCATTATGGAACAAGCATGCATTGATGCAGAGAAGGATGGAATTTCTTGTGAACTTATAGATTTGAAAACTTTAATACCCTGGGACAAAGAAACAGTTGAAGCGTCGGTCAGTAAAACAGGAAGACTTCTTATTAGTCATGAAGCTCCGGTTACTGGAGGTTTTGGTGCTGAGATCTCTGCTTCCATTATGGAACGTTGCTTCTTAAGATTAGAAGCTCCTGTTGCTAGAGTTTGTGGCTTGGACACCCCATTCCCTCTTGTTTTTGAACCCTTCTACATGCCAACAAAGAACAAGGAAACTGCCCTTACTTTCAGGCTGCTCCACATAATCGGTGCAGATGTATACTACAAGTGGTACCAGATAAGAGCATTATTAGAGAAGCAAGAGAGGTTGTATGAGAGACAATCGGAACTGAAAACTTTGCTGGAAGCATGCTCTGAAGATGTCTCCGTTCAAGCCACCACCGCTACGCCGGTGGAAGACTGGTCAGGACAGTTTGAGTGGGATTCTCGAGCCGATGATGTTAAGTTCAATGTCTTCGGCATTTCTTCATATCGTCCAAATCAGCGAGAGATTATAAATGCTGTGATGAGTGGAAGAGATGTTTTGGTGATTATGGCTGCAGGTGGTGGCAAAAGCCTTTGCTACCAGCTTCCTGCTATCCTTCGCGAAGGAATTGCTCTAGTTGTCAGCCCTTTGCTTTCTTTAATTCAAGATCAGGTAATGGGATTGACTGCCTCGGGCATTCCAGCATTCATGCTCACATCCACCACAAGTAAGGAAGATGAGAAGTTCATATACAAGGCCCTGGAGAGAGGTGAAGGAGACCTCAGATTATTGTATGTCACACCTGAGAAAATATCCAAAAGCAAGAGATTTATGTCCAAGCTTGAAAAATGCCACAATGCTGGTCGCCTTTCTCTTATTTCAATCGATGAGGCTCATTGCTGTAGTCAATGGGGTCATGATTTTCGCCCTGACTACAAAAATCTTGGTATACTAAAAATTCAGTTTCCAAATGTACCTGTAGTAGCATTGACAGCTACTGCTACACTTAAAGTCCAGAATGATCTGATGGAGATGCTGCATATTCCAAGATGTGTAAAGTTTGTCAGCAGTGTTAAACGGCCAAATCTGTTTTATATGGTTCGAGACAAGTCATCTGTTGGGAAGGTGGTTATTGATGAAATTGCTGAATATATAAAGGAATCTTATCCAAATAAGGAATCTGGCATAGTATAA
Protein:  
MGTSLRSIGRRVGGLPLCWRRPFSTAVCDVENQQTAASAKSFNLYSAINQALHIALETDPRAFVFGEDVGFGGVFRCTTGLADRFGKSRVFNTPLCEQGIVGFGIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTIRAPYGAVGHGGHYHSQSPEAFFCHVPGIKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLAVEEVPEHDYMLPLSEAEVIRKGSDITLVGWGAQLSIMEQACIDAEKDGISCELIDLKTLIPWDKETVEASVSKTGRLLISHEAPVTGGFGAEISASIMERCFLRLEAPVARVCGLDTPFPLVFEPFYMPTKNKETALTFRLLHIIGADVYYKWYQIRALLEKQERLYERQSELKTLLEACSEDVSVQATTATPVEDWSGQFEWDSRADDVKFNVFGISSYRPNQREIINAVMSGRDVLVIMAAGGGKSLCYQLPAILREGIALVVSPLLSLIQDQVMGLTASGIPAFMLTSTTSKEDEKFIYKALERGEGDLRLLYVTPEKISKSKRFMSKLEKCHNAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKIQFPNVPVVALTATATLKVQNDLMEMLHIPRCVKFVSSVKRPNLFYMVRDKSSVGKVVIDEIAEYIKESYPNKESGIV